BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030D05SP1|AL429211
(895 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig285 321 2e-87
3x_Contig1183 105 2e-22
3x_Contig188 105 2e-22
>3x_Contig285
Length = 777
Score = 321 bits (150), Expect = 2e-87
Identities = 166/174 (95%), Gaps = 1/174 (0%)
Strand = Plus / Plus
Query: 1 gatctgcatagtaaattggtaaatttatatatttttatatatataaattatatataagtn 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gatctgcatagtaaattggtaaatttatatatttttatatatataaattatatataagta 288
Query: 61 agataaaacttatttatcccccgcbctcccttcccatcccataaagggatgggaaggagc 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 289 agataaaacttatttatcccccgcgctcccttcccatcccataaagggatgggaaggagc 348
Query: 121 gcggggntcaagaatttatctataattatattaattwtaatwwtadttatatat 174
|||||| ||||||||||||||||||||||| ||||| |||| || ||||||||
Sbjct: 349 gcgggggtcaagaatttatctataattata-taattataataataattatatat 401
>3x_Contig1183
Length = 3176
Score = 105 bits (49), Expect = 2e-22
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 809 aaaaaaawaaaaaaaaaaaaaaraaaaaaaaaaaataaaaattaaaaagaaataaaaaaa 868
||||||| |||||||||||||| |||||||||||| ||||| ||||| |||||||||||
Sbjct: 64 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaataaaaaaa 123
Query: 869 aaakaaatataaaaaaaataaaaaa 893
||| ||| | |||||||| ||||||
Sbjct: 124 aaaaaaaaaaaaaaaaaaaaaaaaa 148
Score = 105 bits (49), Expect = 2e-22
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 809 aaaaaaawaaaaaaaaaaaaaaraaaaaaaaaaaataaaaattaaaaagaaataaaaaaa 868
||||||| |||||||||||||| |||||||||||| ||||| ||||| ||| |||||||
Sbjct: 47 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa 106
Query: 869 aaakaaatataaaaaaaataaaaaa 893
||| ||| |||||||||| ||||||
Sbjct: 107 aaaaaaaaataaaaaaaaaaaaaaa 131
Score = 105 bits (49), Expect = 2e-22
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 809 aaaaaaawaaaaaaaaaaaaaaraaaaaaaaaaaataaaaattaaaaagaaataaaaaaa 868
||||||| |||||||||||||| |||||||||||||||||| ||||| ||| |||||||
Sbjct: 81 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaataaaaaaaaaaaaaaaaaaaaaaaa 140
Query: 869 aaakaaatataaaaaaaataaaaaa 893
||| ||| | |||||||| ||||||
Sbjct: 141 aaaaaaaaaaaaaaaaaaaaaaaaa 165
Score = 105 bits (49), Expect = 2e-22
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 809 aaaaaaawaaaaaaaaaaaaaaraaaaaaaaaaaataaaaattaaaaagaaataaaaaaa 868
||||||| |||||||||||||| |||||||||||| ||||| ||||| ||| |||||||
Sbjct: 49 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa 108
Query: 869 aaakaaatataaaaaaaataaaaaa 893
||| ||||| |||||||| ||||||
Sbjct: 109 aaaaaaataaaaaaaaaaaaaaaaa 133
Score = 105 bits (49), Expect = 2e-22
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 809 aaaaaaawaaaaaaaaaaaaaaraaaaaaaaaaaataaaaattaaaaagaaataaaaaaa 868
||||||| |||||||||||||| |||||||||||| |||||| ||||| ||| |||||||
Sbjct: 75 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaataaaaaaaaaaaaaaaaaa 134
Query: 869 aaakaaatataaaaaaaataaaaaa 893
||| ||| | |||||||| ||||||
Sbjct: 135 aaaaaaaaaaaaaaaaaaaaaaaaa 159
Score = 105 bits (49), Expect = 2e-22
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 809 aaaaaaawaaaaaaaaaaaaaaraaaaaaaaaaaataaaaattaaaaagaaataaaaaaa 868
||||||| |||||||||||||| |||||||||||| ||||| |||||| ||| |||||||
Sbjct: 74 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaataaaaaaaaaaaaaaaaa 133
Query: 869 aaakaaatataaaaaaaataaaaaa 893
||| ||| | |||||||| ||||||
Sbjct: 134 aaaaaaaaaaaaaaaaaaaaaaaaa 158
Score = 105 bits (49), Expect = 2e-22
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 809 aaaaaaawaaaaaaaaaaaaaaraaaaaaaaaaaataaaaattaaaaagaaataaaaaaa 868
||||||| |||||||||||||| |||||||||||| ||||| ||||| ||| |||||||
Sbjct: 38 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa 97
Query: 869 aaakaaatataaaaaaaataaaaaa 893
||| ||| | |||||||||||||||
Sbjct: 98 aaaaaaaaaaaaaaaaaataaaaaa 122
Score = 105 bits (49), Expect = 2e-22
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 809 aaaaaaawaaaaaaaaaaaaaaraaaaaaaaaaaataaaaattaaaaagaaataaaaaaa 868
||||||| |||||||||||||| |||||||||||| ||||| ||||| ||| |||||||
Sbjct: 157 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa 216
Query: 869 aaakaaatataaaaaaaataaaaaa 893
||| ||| | |||||||||||||||
Sbjct: 217 aaaaaaaaaaaaaaaaaataaaaaa 241
Score = 105 bits (49), Expect = 2e-22
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 809 aaaaaaawaaaaaaaaaaaaaaraaaaaaaaaaaataaaaattaaaaagaaataaaaaaa 868
||||||| |||||||||||||| |||||||||||||||||| ||||| ||| |||||||
Sbjct: 200 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaataaaaaaaaaaaacaaaaaaaaaaa 259
Query: 869 aaakaaatataaaaaaaataaaaaa 893
||| ||| | |||||||| ||||||
Sbjct: 260 aaaaaaaaaaaaaaaaaaaaaaaaa 284
Score = 103 bits (48), Expect = 8e-22
Identities = 110/135 (81%)
Strand = Plus / Plus
Query: 759 aaaaaaaawaaaaataaagaaaaadaaatatgnaawaagataaantaganaaaaaaawaa 818
|||||||| ||||| ||| ||||| ||| || || || | ||| | | ||||||| ||
Sbjct: 86 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaataaaaaaaaaaaaaaaaaaaaaaaaaaaaa 145
Query: 819 aaaaaaaaaaaaraaaaaaaaaaaataaaaattaaaaagaaataaaaaaaaaakaaatat 878
|||||||||||| |||||||||||| ||||| ||||| ||| |||||||||| ||| |
Sbjct: 146 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa 205
Query: 879 aaaaaaaataaaaaa 893
|||||||| ||||||
Sbjct: 206 aaaaaaaaaaaaaaa 220
Score = 100 bits (47), Expect = 4e-21
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 809 aaaaaaawaaaaaaaaaaaaaaraaaaaaaaaaaataaaaattaaaaagaaataaaaaaa 868
||||||| |||||||||||||| |||||||||||| ||||| ||||| ||| |||||||
Sbjct: 53 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa 112
Query: 869 aaakaaatataaaaaaaataaaaaa 893
||| ||| | |||||||| ||||||
Sbjct: 113 aaataaaaaaaaaaaaaaaaaaaaa 137
>3x_Contig188
Length = 1487
Score = 105 bits (49), Expect = 2e-22
Identities = 75/84 (89%), Gaps = 2/84 (2%)
Strand = Plus / Minus
Query: 809 aaaaaaawaaaaaaaaaaaaaaraaaaaaaaaaaataaaaat--taaaaagaaataaaaa 866
||||||| |||||||||||||| |||||||||||| |||||| |||||| ||| |||||
Sbjct: 1309 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaatgataaaaaaaaaaaaaaa 1250
Query: 867 aaaaakaaatataaaaaaaataaa 890
||||| ||| ||||||||||||||
Sbjct: 1249 aaaaaaaaaaataaaaaaaataaa 1226
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.48 0.724 1.39
Gapped
Lambda K H
1.48 0.724 1.39
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 33,683
Number of Sequences: 1807
Number of extensions: 33683
Number of successful extensions: 10918
Number of sequences better than 1.0e-20: 3
length of query: 895
length of database: 10,358,551
effective HSP length: 15
effective length of query: 880
effective length of database: 10,331,446
effective search space: 9091672480
effective search space used: 9091672480
T: 0
A: 40
X1: 5 (10.7 bits)
X2: 14 (29.9 bits)
S1: 11 (24.0 bits)
S2: 47 (101.0 bits)